Book Chapter
Details
Citation
Marz M, Wehner S & Stadler PF (2014) Homology Search for Small Structured Non-coding RNAs. In: Hartmann R, Bindereif A, Schon A & Westhof E (eds.) Handbook of RNA Biochemistry. Weinheim: Wiley-VCH Verlag GmbH & Co. KGaA, pp. 619-632. http://dx.doi.org/10.1002/9783527647064.ch29; https://doi.org/10.1002/9783527647064.ch29
Keywords
homology search;
NCBI;
BLAST;
FASTA;
GenBank;
nucleotide blast;
ENSEMBL;
structured non-coding RNAs (ncRNAs);
secondary structure;
Weblogo;
locARNA;
emacs;
SARSE;
gotohscan;
fragrep;
RNAfold;
RNAalifold;
RNAz;
clustalw;
rnabob;
infernal;
covariance model (CM);
mascRNA;
menRNA;
MALAT-1 transcript;
NEAT1 transcript;
RNase P cleavage;
cloverleaf structure
| Status | Published |
|---|---|
| Publication date | 31/12/2014 |
| Publisher | Wiley-VCH Verlag GmbH & Co. KGaA |
| Publisher URL | |
| Place of publication | Weinheim |
| ISBN | 9783527647064 |
| eISBN | 9783527619504 |